2YDW		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4, WSH BindingDB	enzyme
Primary reference	Discovery and Characterization of Small Molecule Inhibitors of the BET Family Bromodomains., Chung CW, Coste H, White JH, Mirguet O, Wilde J, Gosmini RL, Delves C, Magny SM, Woodward R, Hughes SA, Boursier EV, Flynn H, Bouillot AM, Bamborough P, Brusq JM, Gellibert FJ, Jones EJ, Riou AM, Homes P, Martin SL, Uings IJ, Toum J, Clement CA, Boullay AB, Grimley RL, Blandel FM, Prinjha RK, Lee K, Kirilovsky J, Nicodeme E, J Med Chem. 2011 Jun 9;54(11):3827-3838. Epub 2011 May 13. PMID:21568322

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (2ydw.pdb1.gz) 77 Kb Biological Unit Coordinates (2ydw.pdb2.gz) 77 Kb LPC: Ligand-Protein Contacts for 2YDW CSU: Contacts of Structural Units for 2YDW Structure Factors (579 Kb) Retrieve 2YDW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YDW from S2C, [Save to disk] Re-refined 2ydw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YDW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ydw] [2ydw_A] [2ydw_B] [2ydw_C] SWISS-PROT database: Domain found in 2YDW: [BROMO ] by SMART

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