2YDX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, NAP, SO4, STL, TXP	enzyme
Gene Ontology	Chain Function Process Component E, C, D, B, A methionine adenosyltransfera...
Primary reference	Insight into S-adenosylmethionine biosynthesis from the crystal structures of the human methionine adenosyltransferase catalytic and regulatory subunits., Shafqat N, Muniz JR, Pilka ES, Papagrigoriou E, von Delft F, Oppermann U, Yue WW, Biochem J. 2013 May 15;452(1):27-36. doi: 10.1042/BJ20121580. PMID:23425511

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk] Biological Unit Coordinates (2ydx.pdb1.gz) 216 Kb Biological Unit Coordinates (2ydx.pdb2.gz) 163 Kb Biological Unit Coordinates (2ydx.pdb3.gz) 159 Kb LPC: Ligand-Protein Contacts for 2YDX CSU: Contacts of Structural Units for 2YDX Structure Factors (4138 Kb) Retrieve 2YDX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YDX from S2C, [Save to disk] Re-refined 2ydx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YDX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ydx] [2ydx_A] [2ydx_B] [2ydx_C] [2ydx_D] [2ydx_E] SWISS-PROT database:

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