2YF3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, MN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, F, E, C


Primary referenceStructural and Functional Insights into DR2231 Protein, the MazG-like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus radiodurans., Goncalves AM, de Sanctis D, McSweeney SM, J Biol Chem. 2011 Sep 2;286(35):30691-705. Epub 2011 Jul 6. PMID:21733847
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (458 Kb) [Save to disk]
  • Biological Unit Coordinates (2yf3.pdb1.gz) 149 Kb
  • Biological Unit Coordinates (2yf3.pdb2.gz) 155 Kb
  • Biological Unit Coordinates (2yf3.pdb3.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 2YF3
  • CSU: Contacts of Structural Units for 2YF3
  • Structure Factors (4553 Kb)
  • Retrieve 2YF3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YF3 from S2C, [Save to disk]
  • Re-refined 2yf3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YF3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yf3_A] [2yf3] [2yf3_B] [2yf3_C] [2yf3_D] [2yf3_E] [2yf3_F]
  • SWISS-PROT database:

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