2YG2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FLC, S1P enzyme
note 2YG2 is a representative structure
Primary referenceEndothelium-protective sphingosine-1-phosphate provided by HDL-associated apolipoprotein M., Christoffersen C, Obinata H, Kumaraswamy SB, Galvani S, Ahnstrom J, Sevvana M, Egerer-Sieber C, Muller YA, Hla T, Nielsen LB, Dahlback B, Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9613-8. Epub 2011 May 23. PMID:21606363
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (2yg2.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2yg2.pdb2.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2YG2
  • CSU: Contacts of Structural Units for 2YG2
  • Structure Factors (527 Kb)
  • Retrieve 2YG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YG2 from S2C, [Save to disk]
  • Re-refined 2yg2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2YG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yg2] [2yg2_A] [2yg2_B]
  • SWISS-PROT database:

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