2YGT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, IMD, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Insights into Delta Toxin Pore Formation., Huyet J, Naylor CE, Savva CG, Gibert M, Popoff MR, Basak AK, PLoS One. 2013 Jun 21;8(6):e66673. Print 2013. PMID:23805259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2ygt.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 2YGT
  • CSU: Contacts of Structural Units for 2YGT
  • Structure Factors (98 Kb)
  • Retrieve 2YGT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YGT from S2C, [Save to disk]
  • Re-refined 2ygt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YGT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ygt] [2ygt_A]
  • SWISS-PROT database:

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