2YI0 Chaperone date May 10, 2011
title Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
authors S.M.Roe, C.Prodromou, L.H.Pearl
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Fragment: N-Terminal Domain, Residues 1-229
Synonym: Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Carcinoma Ny-Ren-38, Hsp90;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.19712 R_Free 0.23390
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.430 89.315 100.090 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand MG, YI0 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCo-crystalization and in vitro biological characterization of 5-aryl-4-(5-substituted-2-4-dihydroxyphenyl)-1,2,3-thiadiazole hsp90 inhibitors., Sharp SY, Roe SM, Kazlauskas E, Cikotiene I, Workman P, Matulis D, Prodromou C, PLoS One. 2012;7(9):e44642. Epub 2012 Sep 11. PMID:22984537
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2yi0.pdb1.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 2YI0
  • CSU: Contacts of Structural Units for 2YI0
  • Structure Factors (531 Kb)
  • Retrieve 2YI0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YI0 from S2C, [Save to disk]
  • Re-refined 2yi0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2YI0 in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 2YI0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2YI0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yi0_A] [2yi0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2YI0: [HATPase_c ] by SMART
    • Other resources with information on 2YI0
  • Community annotation for 2YI0 at PDBWiki (http://pdbwiki.org)
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