2YKO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, MSE	enzyme
Primary reference	Trimeric structure and flexibility of the L1ORF1 protein in human L1 retrotransposition., Khazina E, Truffault V, Buttner R, Schmidt S, Coles M, Weichenrieder O, Nat Struct Mol Biol. 2011 Aug 7. doi: 10.1038/nsmb.2097. PMID:21822284

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (321 Kb) [Save to disk] Biological Unit Coordinates (2yko.pdb1.gz) 312 Kb LPC: Ligand-Protein Contacts for 2YKO CSU: Contacts of Structural Units for 2YKO Structure Factors (1221 Kb) Retrieve 2YKO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YKO from S2C, [Save to disk] Re-refined 2yko structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YKO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yko] [2yko_A] [2yko_B] [2yko_C] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---