2YNV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, OCS, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of Pseudomonas aeruginosa GIM-1: active-site plasticity in metallo-beta-lactamases., Borra PS, Samuelsen O, Spencer J, Walsh TR, Lorentzen MS, Leiros HK, Antimicrob Agents Chemother. 2013 Feb;57(2):848-54. doi: 10.1128/AAC.02227-12., Epub 2012 Dec 3. PMID:23208706
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (210 Kb) [Save to disk]
  • Biological Unit Coordinates (2ynv.pdb1.gz) 202 Kb
  • LPC: Ligand-Protein Contacts for 2YNV
  • CSU: Contacts of Structural Units for 2YNV
  • Structure Factors (350 Kb)
  • Retrieve 2YNV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YNV from S2C, [Save to disk]
  • Re-refined 2ynv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YNV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ynv] [2ynv_A] [2ynv_B]
  • SWISS-PROT database:
  • Domain found in 2YNV: [Lactamase_B ] by SMART

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