2YU4 Apoptosis date Apr 05, 2007
title Solution Structure Of The Sp-Ring Domain In Non-Smc Element Homolog (Mms21, S. Cerevisiae)
authors F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Tarada, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: E3 Sumo-Protein Ligase Nse2
Chain: A
Fragment: Sp-Ring Domain
Synonym: Non-Structural Maintenance Of Chromosomes Element Homolog, Non-Smc Element 2 Homolog, Hmms21;
Ec: 6.-.-.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C8orf36
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-25
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme Ligase E.C.6 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (501 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2YU4
  • CSU: Contacts of Structural Units for 2YU4
  • Original NMR restraints for 2YU4 from PDB
  • Retrieve 2YU4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YU4 from S2C, [Save to disk]
  • View 2YU4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YU4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YU4, from MSDmotif at EBI
  • Fold representative 2yu4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yu4_A] [2yu4]
  • SWISS-PROT database: [Q96MF7]
  • Domain organization of [NSE2_HUMAN] by SWISSPFAM
  • Other resources with information on 2YU4
  • Community annotation for 2YU4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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