2YVO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, MG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8., Wakamatsu T, Nakagawa N, Kuramitsu S, Masui R, J Bacteriol. 2008 Feb;190(3):1108-17. Epub 2007 Nov 26. PMID:18039767

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (2yvo.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 2YVO CSU: Contacts of Structural Units for 2YVO Likely Quarternary Molecular Structure file(s) for 2YVO Structure Factors (388 Kb) Retrieve 2YVO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YVO from S2C, [Save to disk] Re-refined 2yvo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YVO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yvo] [2yvo_A] SWISS-PROT database: [Q5SJY9]

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