2Z5S	Cell Cycle	date	Jul 17, 2007
title	Molecular Basis For The Inhibition Of P53 By Mdmx
authors	G.M.Popowicz, A.Czarna, U.Rothweiler, A.Szwagierczak, T.A.Holak
compound		source
Molecule: Mdm4 Protein Chain: M, N, O Fragment: Swib Domain Synonym: Zebrafish Mdmx Engineered: Yes		Organism_scientific: Danio Rerio Organism_common: Zebrafish Organism_taxid: 7955 Gene: Mdm4 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-46
Molecule: Cellular Tumor Antigen P53 Chain: P, Q, R Fragment: Transactivation Domain Synonym: Tumor Suppressor P53, Phosphoprotein P53, Antigen Engineered: Yes		Synthetic: Yes Other_details: Rp Hplc Purified
symmetry	Space Group: P 1 21 1	R_factor 0.247 R_Free 0.310
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.520 30.440 100.850 90.00 102.47 90.00
method	X-Ray Diffraction	resolution	2.30 Å
Gene Ontology	Chain Function Process Component O, M, N
Primary reference	Molecular Basis for the Inhibition of p53 by Mdmx., Popowicz GM, Czarna A, Rothweiler U, Sszwagierczak A, Krajewski M, Weber L, Holak TA, Cell Cycle. 2007 Jul 12;6(19). PMID:17938582

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (2z5s.pdb1.gz) 19 Kb Biological Unit Coordinates (2z5s.pdb2.gz) 18 Kb Biological Unit Coordinates (2z5s.pdb3.gz) 16 Kb CSU: Contacts of Structural Units for 2Z5S Likely Quarternary Molecular Structure file(s) for 2Z5S Structure Factors (165 Kb) Retrieve 2Z5S in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Z5S from S2C, [Save to disk] Re-refined 2z5s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Z5S in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2Z5S

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2Z5S, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2z5s] [2z5s_M] [2z5s_O] [2z5s_N] [2z5s_R] [2z5s_P] [2z5s_Q] SWISS-PROT database: [Q7ZUW7] [P04637] Belongs to the pore-forming pnc-27 peptide of 32 aas from the p53 tumor suppressor protein (pnc-27) family according to TCDB. Domain organization of [MDM4_DANRE] [P53_HUMAN] by SWISSPFAM

Other resources with information on 2Z5S

Community annotation for 2Z5S at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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