2ZAY Signaling Protein date Oct 12, 2007
title Crystal Structure Of Response Regulator From Desulfuromonas Acetoxidans
authors A.A.Fedorov, E.V.Fedorov, A.Meyer, J.M.Sauder, S.K.Burley, S.C.Al York Sgx Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Response Regulator Receiver Protein
Chain: A, B
Fragment: Residues 150-285
Engineered: Yes
Organism_scientific: Desulfuromonas Acetoxidans
Organism_taxid: 281689
Strain: Dsm 684
Gene: Dace_1490
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.225 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.215 59.016 88.967 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
note 2ZAY is a representative structure
Gene DACE
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (2zay.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (2zay.pdb2.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2ZAY
  • Likely Quarternary Molecular Structure file(s) for 2ZAY
  • Structure Factors (194 Kb)
  • Retrieve 2ZAY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZAY from S2C, [Save to disk]
  • Re-refined 2zay structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZAY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZAY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZAY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zay] [2zay_A] [2zay_B]
  • SWISS-PROT database: [Q1JZD9]
  • Domain organization of [Q1JZD9_DESAC] by SWISSPFAM
  • Domain found in 2ZAY: [REC ] by SMART
  • Other resources with information on 2ZAY
  • Community annotation for 2ZAY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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