2ZKD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5CM, ACT, EDO enzyme
Primary referenceRecognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism., Arita K, Ariyoshi M, Tochio H, Nakamura Y, Shirakawa M, Nature. 2008 Oct 9;455(7214):818-21. Epub 2008 Sep 3. PMID:18772891
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (2zkd.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (2zkd.pdb2.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2ZKD
  • CSU: Contacts of Structural Units for 2ZKD
  • Likely Quarternary Molecular Structure file(s) for 2ZKD
  • Structure Factors (1140 Kb)
  • Retrieve 2ZKD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZKD from S2C, [Save to disk]
  • Re-refined 2zkd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2ZKD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zkd] [2zkd_A] [2zkd_B] [2zkd_C] [2zkd_D] [2zkd_E] [2zkd_F]
  • SWISS-PROT database: [Q8VDF2]
  • Domain found in 2ZKD: [SRA ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science