351D Dna date Aug 30, 1997
title X-Ray Crystal Structures Of The Hexamer Dcacgcg: Crystals Gr Presence Of Ruthenium (II) Hexammine Chloride
authors P.Karthe, N.Gautham
compound source
Molecule: Dna (5'-D(Cpapcpgpcpg)-3')
Chain: A
Engineered: Yes


Molecule: Dna (5'-D(Cpgpcpgptpg)-3')
Chain: B
Engineered: Yes

symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
17.880 30.870 44.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.64 Å
Primary referenceStructure of d(CACGCG).d(CGCGTG) in crystals grown in the presence of ruthenium III hexammine chloride., Karthe P, Gautham N, Acta Crystallogr D Biol Crystallogr 1998 Jul 1;54 ( Pt 4):501-9. PMID:9761846
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (9 Kb) [Save to disk]
  • Biological Unit Coordinates (351d.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 351D
  • Likely Quarternary Molecular Structure file(s) for 351D
  • Retrieve 351D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 351D from S2C, [Save to disk]
  • View 351D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 351D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 351D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [351d_A] [351d_B] [351d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 351D
  • Community annotation for 351D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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