3A5D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
I, B, C, K, J, A


N, F, D, E, L, M


O, G


P, H


Primary referenceInter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V(1)-ATPase., Numoto N, Hasegawa Y, Takeda K, Miki K, EMBO Rep. 2009 Sep 25. PMID:19779483
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (578 Kb) [Save to disk]
  • Biological Unit Coordinates (3a5d.pdb1.gz) 278 Kb
  • Biological Unit Coordinates (3a5d.pdb2.gz) 279 Kb
  • CSU: Contacts of Structural Units for 3A5D
  • Structure Factors (541 Kb)
  • Retrieve 3A5D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3A5D from S2C, [Save to disk]
  • Re-refined 3a5d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3A5D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3a5d] [3a5d_A] [3a5d_B] [3a5d_C] [3a5d_D] [3a5d_E] [3a5d_F] [3a5d_G] [3a5d_H] [3a5d_I] [3a5d_J] [3a5d_K] [3a5d_L] [3a5d_M] [3a5d_N] [3a5d_O] [3a5d_P]
  • SWISS-PROT database: [Q56403] [Q56404] [O87880] [P74903]
  • Belongs to the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily according to TCDB.

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