3A8Z	Hydrolase	date	Oct 15, 2009
title	Crystal Structure Of Hen Egg White Lysozyme
authors	S.Abe, T.Koshiyama, T.Ohki, T.Hikage, Y.Watanabe, T.Ueno
compound		source
Molecule: Lysozyme C Chain: A Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Tissue: Egg White
symmetry	Space Group: P 43 21 2	R_factor 0.193 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.785 78.785 36.961 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	CL, GOL, NA	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces., Ueno T, Abe S, Koshiyama T, Ohki T, Hikage T, Watanabe Y, Chemistry. 2010 Mar 1;16(9):2730-40. PMID:20146274

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk] Biological Unit Coordinates (3a8z.pdb1.gz) 24 Kb LPC: Ligand-Protein Contacts for 3A8Z CSU: Contacts of Structural Units for 3A8Z Structure Factors (288 Kb) Retrieve 3A8Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3A8Z from S2C, [Save to disk] Re-refined 3a8z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3A8Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3A8Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3A8Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3a8z_A] [3a8z] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3A8Z: [LYZ1 ] by SMART

Other resources with information on 3A8Z

Community annotation for 3A8Z at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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