3ABK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CU, CUA, DMU, FME, HEA, MG, NA, NO, PEK, PGV, PSC, SAC, TGL, TPO, UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, O
  • cytochrome-c oxidase activit...


    • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • E, R


    F, S


    G, T


    I, V
  • cytochrome-c oxidase activit...


    • L, Y


    M, Z


    N, A


    Q, D


    U, H


    W, J


    X, K


    Primary referenceX-ray structure of the NO-bound Cu(B) in bovine cytochrome c oxidase., Ohta K, Muramoto K, Shinzawa-Itoh K, Yamashita E, Yoshikawa S, Tsukihara T, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Mar 1;66(Pt, 3):251-3. Epub 2010 Feb 23. PMID:20208153
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (668 Kb) [Save to disk]
  • Biological Unit Coordinates (3abk.pdb1.gz) 329 Kb
  • Biological Unit Coordinates (3abk.pdb2.gz) 327 Kb
  • LPC: Ligand-Protein Contacts for 3ABK
  • CSU: Contacts of Structural Units for 3ABK
  • Structure Factors (3423 Kb)
  • Retrieve 3ABK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ABK from S2C, [Save to disk]
  • Re-refined 3abk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ABK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3abk] [3abk_A] [3abk_B] [3abk_C] [3abk_D] [3abk_E] [3abk_F] [3abk_G] [3abk_H] [3abk_I] [3abk_J] [3abk_K] [3abk_L] [3abk_M] [3abk_N] [3abk_O] [3abk_P] [3abk_Q] [3abk_R] [3abk_S] [3abk_T] [3abk_U] [3abk_V] [3abk_W] [3abk_X] [3abk_Y] [3abk_Z]
  • SWISS-PROT database:

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