3AG1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CMO, CU, CUA, DMU, FME, HEA, MG, NA, PEK, PGV, PSC, SAC, TGL, TPO, UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, O
  • cytochrome-c oxidase activit...


    • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • D, Q


    E, R


    G, T


    H, U


    I, V
  • cytochrome-c oxidase activit...


    • K, X


    M, Z


    N, A


    S, F


    W, J


    Y, L


    Primary referenceBovine cytochrome c oxidase structures enable O2 reduction with minimization of reactive oxygens and provide a proton-pumping gate., Muramoto K, Ohta K, Shinzawa-Itoh K, Kanda K, Taniguchi M, Nabekura H, Yamashita E, Tsukihara T, Yoshikawa S, Proc Natl Acad Sci U S A. 2010 Apr 12. PMID:20385840
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (664 Kb) [Save to disk]
  • Biological Unit Coordinates (3ag1.pdb1.gz) 327 Kb
  • Biological Unit Coordinates (3ag1.pdb2.gz) 325 Kb
  • LPC: Ligand-Protein Contacts for 3AG1
  • CSU: Contacts of Structural Units for 3AG1
  • Structure Factors (2715 Kb)
  • Retrieve 3AG1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AG1 from S2C, [Save to disk]
  • Re-refined 3ag1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3AG1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ag1] [3ag1_A] [3ag1_B] [3ag1_C] [3ag1_D] [3ag1_E] [3ag1_F] [3ag1_G] [3ag1_H] [3ag1_I] [3ag1_J] [3ag1_K] [3ag1_L] [3ag1_M] [3ag1_N] [3ag1_O] [3ag1_P] [3ag1_Q] [3ag1_R] [3ag1_S] [3ag1_T] [3ag1_U] [3ag1_V] [3ag1_W] [3ag1_X] [3ag1_Y] [3ag1_Z]
  • SWISS-PROT database:

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