3ALP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CIT, HEZ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of the cis-Dimer of Nectin-1: implications for the architecture of cell-cell junctions., Narita H, Yamamoto Y, Suzuki M, Miyazaki N, Yoshida A, Kawai K, Iwasaki K, Nakagawa A, Takai Y, Sakisaka T, J Biol Chem. 2011 Apr 8;286(14):12659-69. Epub 2011 Feb 15. PMID:21325282
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (3alp.pdb1.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 3ALP
  • CSU: Contacts of Structural Units for 3ALP
  • Structure Factors (684 Kb)
  • Retrieve 3ALP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ALP from S2C, [Save to disk]
  • Re-refined 3alp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ALP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3alp] [3alp_A] [3alp_B]
  • SWISS-PROT database:
  • Domains found in 3ALP: [IG_like] [IGv ] by SMART

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