3AX8	Transcription	date	Mar 30, 2011
title	Crystal Structure Of The Human Vitamin D Receptor Ligand Bin Domain Complexed With 15alpha-Methoxy-1alpha,25-Dihydroxyvi
authors	S.Kakuda, M.Takimoto-Kamimura
compound		source
Molecule: Vitamin D3 Receptor Chain: A Fragment: Ligand Binding Domain, Residues 118-427 Synonym: Vdr, 1,25-Dihydroxyvitamin D3 Receptor, Nuclear Re Subfamily 1 Group I Member 1; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vdr, Nr1i1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.215 R_Free 0.294
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.489 51.585 132.017 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	EIM	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	New C15-substituted active vitamin D3., Shindo K, Kumagai G, Takano M, Sawada D, Saito N, Saito H, Kakuda S, Takagi K, Ochiai E, Horie K, Takimoto-Kamimura M, Ishizuka S, Takenouchi K, Kittaka A, Org Lett. 2011 Jun 3;13(11):2852-5. Epub 2011 May 3. PMID:21539305

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (3ax8.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 3AX8 CSU: Contacts of Structural Units for 3AX8 Structure Factors (147 Kb) Retrieve 3AX8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AX8 from S2C, [Save to disk] Re-refined 3ax8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3AX8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ax8] [3ax8_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3AX8: [HOLI ] by SMART

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