3B1S Protein Transport date Jul 08, 2011
title Crystal Structure Of The Cytoplasmic Domain Of Flhb From Aqu Aeolicus
authors V.A.Meshcheryakov, F.A.Samatey
compound source
Molecule: Flagellar Biosynthetic Protein Flhb
Chain: A, C, E
Fragment: C-Terminal Domain, Residues 213-263
Engineered: Yes
Other_details: Auto-Cleaved Between Residues 263 And 264
Organism_scientific: Aquifex Aeolicus
Organism_taxid: 63363
Gene: Flhb
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Flagellar Biosynthetic Protein Flhb
Chain: B, D, F
Fragment: C-Terminal Domain, Residues 264-350
Engineered: Yes
Other_details: Auto-Cleaved Between Residues 263 And 264

Organism_scientific: Aquifex Aeolicus
Organism_taxid: 63363
Gene: Flhb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.241 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.600 33.750 122.370 90.00 107.78 90.00
method X-Ray Diffractionresolution 2.55 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceInhibition of a type III secretion system by the deletion of a short loop in one of its membrane proteins., Meshcheryakov VA, Kitao A, Matsunami H, Samatey FA, Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):812-20. doi:, 10.1107/S0907444913002102. Epub 2013 Apr 11. PMID:23633590
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3b1s.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (3b1s.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (3b1s.pdb3.gz) 19 Kb
  • CSU: Contacts of Structural Units for 3B1S
  • Structure Factors (221 Kb)
  • Retrieve 3B1S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B1S from S2C, [Save to disk]
  • Re-refined 3b1s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B1S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3B1S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3B1S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b1s_F] [3b1s_E] [3b1s] [3b1s_D] [3b1s_B] [3b1s_A] [3b1s_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3B1S
  • Community annotation for 3B1S at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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