3B8Q date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 900 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNaphthamides as novel and potent vascular endothelial growth factor receptor tyrosine kinase inhibitors: design, synthesis, and evaluation., Harmange JC, Weiss MM, Germain J, Polverino AJ, Borg G, Bready J, Chen D, Choquette D, Coxon A, Demelfi T, Dipietro L, Doerr N, Estrada J, Flynn J, Graceffa RF, Harriman SP, Kaufman S, La DS, Long A, Martin MW, Neervannan S, Patel VF, Potashman M, Regal K, Roveto PM, Schrag ML, Starnes C, Tasker A, Teffera Y, Wang L, White RD, Whittington DA, Zanon R, J Med Chem. 2008 Mar 27;51(6):1649-67. Epub 2008 Mar 7. PMID:18324761
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (3b8q.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (3b8q.pdb2.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3B8Q
  • CSU: Contacts of Structural Units for 3B8Q
  • Likely Quarternary Molecular Structure file(s) for 3B8Q
  • Structure Factors (117 Kb)
  • Retrieve 3B8Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B8Q from S2C, [Save to disk]
  • Re-refined 3b8q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B8Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b8q] [3b8q_A] [3b8q_B]
  • SWISS-PROT database: [P35968]
  • Domain found in 3B8Q: [TyrKc ] by SMART

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