3BBU Ribosome date Nov 11, 2007
title The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex
authors L.Jiang, J.P.Abrahams
compound source
Molecule: Heat Shock Protein 15
Chain: A
Synonym: Hsp15
Other_details: Part Of The 50s Ribosomal Particle In Assemb Trna
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method Electron Microscopyresolution 10.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRecycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15., Jiang L, Schaffitzel C, Bingel-Erlenmeyer R, Ban N, Korber P, Koning RI, de Geus DC, Plaisier JR, Abrahams JP, J Mol Biol. 2009 Mar 13;386(5):1357-67. Epub 2008 Nov 5. PMID:19013177
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (3bbu.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 3BBU
  • Retrieve 3BBU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BBU from S2C, [Save to disk]
    • View 3BBU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BBU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BBU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bbu] [3bbu_A]
  • SWISS-PROT database: [P0ACG8]
  • Domain organization of [HSLR_ECOLI] by SWISSPFAM
  • Domain found in 3BBU: [S4 ] by SMART
    • Other resources with information on 3BBU
  • Community annotation for 3BBU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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