3BEY Structural Genomics, Unknown Function date Nov 20, 2007
title Crystal Structure Of The Protein O27018 From Methanobacteriu Thermoautotrophicum. Northeast Structural Genomics Consorti Tt217
authors A.P.Kuzin, J.Gu, X.Xu, H.Neely, F.Forouhar, L.Owens, L.Mao, R.Xiao, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Conserved Protein O27018
Chain: A, B, C, D, E, F
Engineered: Yes
 Organism_scientific: Methanothermobacter Thermautotrophicus
Organism_taxid: 187420
Strain: Delta H
Gene: Mth935
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.206 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.528 71.985 61.418 90.00 99.08 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • peroxiredoxin activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (3bey.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 3BEY
  • CSU: Contacts of Structural Units for 3BEY
  • Likely Quarternary Molecular Structure file(s) for 3BEY
  • Structure Factors (318 Kb)
  • Retrieve 3BEY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BEY from S2C, [Save to disk]
  • Re-refined 3bey structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BEY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BEY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BEY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bey_B] [3bey_A] [3bey_E] [3bey_C] [3bey_D] [3bey_F] [3bey]
  • SWISS-PROT database: [O27018]
  • Domain organization of [O27018_METTH] by SWISSPFAM
    • Other resources with information on 3BEY
  • Community annotation for 3BEY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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