3BM9	Chaperone	date	Dec 12, 2007
title	Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperon
authors	A.Gopalsamy, M.Shi, E.M.Vogan, J.Golas, J.Jacob, J.Johnson, F.Lee, R.Nilakantan, R.Peterson, K.Svenson, M.S.Tam, Y.Wen, R.Chopra, J.Ellingboe, K.Arndt, F.Boschelli
compound		source
Molecule: Heat Shock Protein Hsp 90-Alpha Chain: A Fragment: N-Terminal Domain, Unp Residues 10-236 Synonym: Hsp 86, Renal Carcinoma Antigen Ny-Ren-38 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca Expression_system: Escherichia Coli Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: I 2 2 2	R_factor 0.164 R_Free 0.186
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.089 89.033 100.172 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	BXZ BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90., Gopalsamy A, Shi M, Golas J, Vogan E, Jacob J, Johnson M, Lee F, Nilakantan R, Petersen R, Svenson K, Chopra R, Tam MS, Wen Y, Ellingboe J, Arndt K, Boschelli F, J Med Chem. 2008 Feb 14;51(3):373-5. Epub 2008 Jan 16. PMID:18197612

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (3bm9.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 3BM9 CSU: Contacts of Structural Units for 3BM9 Likely Quarternary Molecular Structure file(s) for 3BM9 Structure Factors (667 Kb) Retrieve 3BM9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BM9 from S2C, [Save to disk] Re-refined 3bm9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BM9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BM9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BM9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bm9_A] [3bm9] SWISS-PROT database: [P07900] Domain organization of [HS90A_HUMAN] by SWISSPFAM Domain found in 3BM9: [HATPase_c ] by SMART

Other resources with information on 3BM9

Community annotation for 3BM9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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