3BQX Structural Genomics, Unknown Function date Dec 20, 2007
title High Resolution Crystal Structure Of A Glyoxalase-Related En Fulvimarina Pelagi
authors K.N.Rao, S.K.Burley, S.Swaminathan, New York Sgx Research Cente Structural Genomics (Nysgxrc)
compound source
Molecule: Glyoxalase-Related Enzyme
Chain: A
Engineered: Yes
 Organism_scientific: Fulvimarina Pelagi
Organism_taxid: 314231
Strain: Htcc2506
Gene: Fp2506_05986
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: C 2 2 21
R_factor 0.238 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.930 69.750 83.070 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand MSE enzyme
Gene FP2506
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (3bqx.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 3BQX
  • CSU: Contacts of Structural Units for 3BQX
  • Likely Quarternary Molecular Structure file(s) for 3BQX
  • Structure Factors (293 Kb)
  • Retrieve 3BQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BQX from S2C, [Save to disk]
  • Re-refined 3bqx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BQX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BQX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bqx_A] [3bqx]
  • SWISS-PROT database: [Q0G7J9]
  • Domain organization of [Q0G7J9_9RHIZ] by SWISSPFAM
    • Other resources with information on 3BQX
  • Community annotation for 3BQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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