3BZW Hydrolase date Jan 18, 2008
title Crystal Structure Of A Putative Lipase From Bacteroides Thetaiotaomicron
authors K.Palani, D.Kumaran, S.K.Burley, S.Swaminathan, New York Sgx Res Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Putative Lipase
Chain: A, B, C, D, E, F
Fragment: Residues 23-285
Engineered: Yes
 Organism_scientific: Bacteroides Thetaiotaomicron Vpi-5482
Organism_taxid: 226186
Strain: Vpi-5482 Dsm 2079 Nctc 10582 E50
Atcc: 29148
Gene: Bt_2961
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bc-Psgx3(Bc)
symmetry Space Group: P 21 21 21
R_factor 0.190 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.225 107.548 144.919 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.87 Å
ligand ACT, MSE, SO4 enzyme
Gene BT
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (3bzw.pdb1.gz) 248 Kb
  • Biological Unit Coordinates (3bzw.pdb2.gz) 126 Kb
  • Biological Unit Coordinates (3bzw.pdb3.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 3BZW
  • CSU: Contacts of Structural Units for 3BZW
  • Likely Quarternary Molecular Structure file(s) for 3BZW
  • Structure Factors (846 Kb)
  • Retrieve 3BZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BZW from S2C, [Save to disk]
  • Re-refined 3bzw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BZW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BZW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bzw_F] [3bzw_B] [3bzw_A] [3bzw] [3bzw_E] [3bzw_D] [3bzw_C]
  • SWISS-PROT database: [Q8A3J3]
  • Domain organization of [Q8A3J3_BACTN] by SWISSPFAM
    • Other resources with information on 3BZW
  • Community annotation for 3BZW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science