3C0Z	Hydrolase	date	Jan 21, 2008
title	Crystal Structure Of Catalytic Domain Of Human Histone Deace Hdac7 In Complex With Saha
authors	J.Min, A.Schuetz, P.Loppnau, J.Weigelt, M.Sundstrom, C.H.Arrowsmi A.M.Edwards, A.Bochkarev, A.N.Plotnikov, Structural Genomics C (Sgc)
compound		source
Molecule: Histone Deacetylase 7a Chain: A, B, C Fragment: Catalytic Domain: Residues 482-903 Synonym: Hd7a, Hdac7 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hdac7a, Hdac7 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a-Mhl
symmetry	Space Group: P 32	R_factor 0.197 R_Free 0.243
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.825 81.825 148.867 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	K, SHH, ZN BindingDB	enzyme
note	3C0Z supersedes 2PQO
Primary reference	Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity., Schuetz A, Min J, Allali-Hassani A, Schapira M, Shuen M, Loppnau P, Mazitschek R, Kwiatkowski NP, Lewis TA, Maglathin RL, McLean TH, Bochkarev A, Plotnikov AN, Vedadi M, Arrowsmith CH, J Biol Chem. 2008 Apr 25;283(17):11355-63. Epub 2008 Feb 19. PMID:18285338

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk] Biological Unit Coordinates (3c0z.pdb1.gz) 62 Kb Biological Unit Coordinates (3c0z.pdb2.gz) 60 Kb Biological Unit Coordinates (3c0z.pdb3.gz) 58 Kb LPC: Ligand-Protein Contacts for 3C0Z CSU: Contacts of Structural Units for 3C0Z Likely Quarternary Molecular Structure file(s) for 3C0Z Structure Factors (944 Kb) Retrieve 3C0Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3C0Z from S2C, [Save to disk] Re-refined 3c0z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3C0Z in 3D

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Visual 3D analysis of 3C0Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3C0Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3c0z_A] [3c0z_B] [3c0z] [3c0z_C] SWISS-PROT database: [Q8WUI4] Domain organization of [HDAC7_HUMAN] by SWISSPFAM

Other resources with information on 3C0Z

Community annotation for 3C0Z at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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