3C4V Transferase date Jan 30, 2008
title Structure Of The Retaining Glycosyltransferase Msha:The Firs Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicu Complex With Udp And 1l-Ins-1-P.
authors M.W.Vetting, P.A.Frantom, J.S.Blanchard
compound source
Molecule: Predicted Glycosyltransferases
Chain: A, B
Ec: 2.4.1.-
Engineered: Yes
Organism_scientific: Corynebacterium Glutamicum
Organism_taxid: 1718
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet29
symmetry Space Group: I 4 2 2
R_factor 0.190 R_Free 0.213
crystal
cell
length a length b length c angle alpha angle beta angle gamma
223.940 223.940 125.005 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand LIP, MG, UDP enzyme Transferase E.C.2.4.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and Enzymatic Analysis of MshA from Corynebacterium glutamicum: SUBSTRATE-ASSISTED CATALYSIS., Vetting MW, Frantom PA, Blanchard JS, J Biol Chem. 2008 Jun 6;283(23):15834-44. Epub 2008 Apr 4. PMID:18390549
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (3c4v.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (3c4v.pdb2.gz) 122 Kb
  • Biological Unit Coordinates (3c4v.pdb3.gz) 956 Kb
  • LPC: Ligand-Protein Contacts for 3C4V
  • CSU: Contacts of Structural Units for 3C4V
  • Likely Quarternary Molecular Structure file(s) for 3C4V
  • Structure Factors (384 Kb)
  • Retrieve 3C4V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3C4V from S2C, [Save to disk]
  • Re-refined 3c4v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3C4V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3C4V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3C4V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3c4v_A] [3c4v] [3c4v_B]
  • SWISS-PROT database: [Q6M7W1]
  • Domain organization of [Q6M7W1_CORGL] by SWISSPFAM
  • Other resources with information on 3C4V
  • Community annotation for 3C4V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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