3CG8 Oxidoreductase date Mar 05, 2008
title Laccase From Streptomyces Coelicolor
authors T.Skalova, J.Dohnalek, L.H.Ostergaard, P.R.Ostergaard, P.Kolenko J.Duskova, J.Hasek
compound source
Molecule: Laccase
Chain: A, B, C
Ec: 1.10.3.2
Engineered: Yes
Organism_scientific: Streptomyces Coelicolor
Organism_taxid: 1902
Strain: A3(2)
Gene: Sc4c6.22
Expression_system: Aspergillus Oryzae
Expression_system_common: Fungi
Expression_system_taxid: 5062
Expression_system_strain: Toc1512
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plaq029
Other_details: Taka Amylase Promoter
symmetry Space Group: P 43 21 2
R_factor 0.172 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
180.868 180.868 177.111 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.68 Å
ligand CU, O, PG4 enzyme Oxidoreductase E.C.1.10.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe Structure of the Small Laccase from Streptomyces coelicolor Reveals a Link between Laccases and Nitrite Reductases., Skalova T, Dohnalek J, Ostergaard LH, Ostergaard PR, Kolenko P, Duskova J, Stepankova A, Hasek J, J Mol Biol. 2008 Nov 25. PMID:19063896
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (3cg8.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 3CG8
  • CSU: Contacts of Structural Units for 3CG8
  • Likely Quarternary Molecular Structure file(s) for 3CG8
  • Structure Factors (4694 Kb)
  • Retrieve 3CG8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CG8 from S2C, [Save to disk]
  • Re-refined 3cg8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CG8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CG8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CG8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cg8_A] [3cg8] [3cg8_C] [3cg8_B]
  • SWISS-PROT database: [Q9XAL8]
  • Domain organization of [Q9XAL8_STRCO] by SWISSPFAM
  • Other resources with information on 3CG8
  • Community annotation for 3CG8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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