3COH Transferase date Mar 28, 2008
title Crystal Structure Of Aurora-A In Complex With A Pentacyclic
authors C.Wiesmann, T.E.Raswson, A.G.Cochran
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A, B
Fragment: Kinase Domain (Unp Residues 124-391)
Synonym: Aurora Kinase A, Aurora-A, Serinethreonine Kinase Auroraipl1-Related Kinase 1, Aurora-Related Kinase 1, Hark Tumor-Amplified Kinase;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aurka, Aik, Ark1, Aura, Btak, Stk15, Stk6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.246 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.542 99.542 138.845 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 83H BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA pentacyclic aurora kinase inhibitor (AKI-001) with high in vivo potency and oral bioavailability., Rawson TE, Ruth M, Blackwood E, Burdick D, Corson L, Dotson J, Drummond J, Fields C, Georges GJ, Goller B, Halladay J, Hunsaker T, Kleinheinz T, Krell HW, Li J, Liang J, Limberg A, McNutt A, Moffat J, Phillips G, Ran Y, Safina B, Ultsch M, Walker L, Wiesmann C, Zhang B, Zhou A, Zhu BY, Ruger P, Cochran AG, J Med Chem. 2008 Aug 14;51(15):4465-75. Epub 2008 Jul 17. PMID:18630890
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (3coh.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (3coh.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 3COH
  • CSU: Contacts of Structural Units for 3COH
  • Likely Quarternary Molecular Structure file(s) for 3COH
  • Structure Factors (527 Kb)
  • Retrieve 3COH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3COH from S2C, [Save to disk]
  • Re-refined 3coh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3COH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3COH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3COH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3coh] [3coh_B] [3coh_A]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 3COH: [S_TKc ] by SMART
  • Other resources with information on 3COH
  • Community annotation for 3COH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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