3CTD	Structural Genomics, Unknown Function	date	Apr 11, 2008
title	Crystal Structure Of A Putative Aaa Family Atpase From Proch Marinus Subsp. Pastoris
authors	J.B.Bonanno, M.Rutter, K.T.Bain, C.Lau, S.Ozyurt, D.Smith, S.Wasse J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound		source
Molecule: Putative Atpase, Aaa Family Chain: A, B Fragment: Residues 228-429 Engineered: Yes Mutation: Yes		Organism_scientific: Prochlorococcus Marinus Subsp. Pastori Ccmp1986; Organism_taxid: 59919 Strain: Ccmp 1378 Med4 Gene: Yrvn, Pmm0077 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet Expression_system_plasmid: Modified Pet26
symmetry	Space Group: P 41 21 2	R_factor 0.211 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.184 108.184 68.685 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (3ctd.pdb1.gz) 96 Kb CSU: Contacts of Structural Units for 3CTD Likely Quarternary Molecular Structure file(s) for 3CTD Structure Factors (687 Kb) Retrieve 3CTD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3CTD from S2C, [Save to disk] Re-refined 3ctd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3CTD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3CTD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3CTD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ctd_B] [3ctd_A] [3ctd] SWISS-PROT database: [Q7V3J8] Domain organization of [Q7V3J8_PROMP] by SWISSPFAM

Other resources with information on 3CTD

Community annotation for 3CTD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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