3D0E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand G93, TPO BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceIdentification of 4-(2-(4-amino-1,2,5-oxadiazol-3-yl)-1-ethyl-7-{[(3S)-3-piperidinylmethyl]o xy}-1H-imidazo[4,5-c]pyridin-4-yl)-2-methyl-3-butyn-2-ol (GSK690693), a novel inhibitor of AKT kinase., Heerding DA, Rhodes N, Leber JD, Clark TJ, Keenan RM, Lafrance LV, Li M, Safonov IG, Takata DT, Venslavsky JW, Yamashita DS, Choudhry AE, Copeland RA, Lai Z, Schaber MD, Tummino PJ, Strum SL, Wood ER, Duckett DR, Eberwein D, Knick VB, Lansing TJ, McConnell RT, Zhang S, Minthorn EA, Concha NO, Warren GL, Kumar R, J Med Chem. 2008 Sep 25;51(18):5663-79. PMID:18800763
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (3d0e.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (3d0e.pdb2.gz) 59 Kb
  • Biological Unit Coordinates (3d0e.pdb3.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 3D0E
  • CSU: Contacts of Structural Units for 3D0E
  • Likely Quarternary Molecular Structure file(s) for 3D0E
  • Structure Factors (1013 Kb)
  • Retrieve 3D0E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D0E from S2C, [Save to disk]
  • Re-refined 3d0e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3D0E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d0e] [3d0e_A] [3d0e_B]
  • SWISS-PROT database: [P31751]
  • Domains found in 3D0E: [S_TK_X] [S_TKc ] by SMART

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