3D3V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand F2F, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Primary referenceFluorine substitutions in an antigenic peptide selectively modulate T-cell receptor binding in a minimally perturbing manner., Piepenbrink KH, Borbulevych OY, Sommese RF, Clemens J, Armstrong KM, Desmond C, Do P, Baker BM, Biochem J. 2009 Oct 12;423(3):353-61. PMID:19698083
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (3d3v.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 3D3V
  • CSU: Contacts of Structural Units for 3D3V
  • Likely Quarternary Molecular Structure file(s) for 3D3V
  • Structure Factors (349 Kb)
  • Retrieve 3D3V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D3V from S2C, [Save to disk]
  • Re-refined 3d3v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3D3V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d3v] [3d3v_A] [3d3v_B] [3d3v_C] [3d3v_D] [3d3v_E]
  • SWISS-PROT database: [P01892] [P61769]
  • Domains found in 3D3V: [IG_like] [IGc1] [IGv ] by SMART

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