3D5E		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DEP, FMT	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal Structure of Human Plasma Platelet-activating Factor Acetylhydrolase: STRUCTURAL IMPLICATION TO LIPOPROTEIN BINDING AND CATALYSIS., Samanta U, Bahnson BJ, J Biol Chem. 2008 Nov 14;283(46):31617-24. Epub 2008 Sep 10. PMID:18784071

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk] Biological Unit Coordinates (3d5e.pdb1.gz) 65 Kb Biological Unit Coordinates (3d5e.pdb2.gz) 65 Kb LPC: Ligand-Protein Contacts for 3D5E CSU: Contacts of Structural Units for 3D5E Likely Quarternary Molecular Structure file(s) for 3D5E Structure Factors (1364 Kb) Retrieve 3D5E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D5E from S2C, [Save to disk] Re-refined 3d5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D5E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d5e] [3d5e_A] [3d5e_B] SWISS-PROT database: [Q13093]

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