3D7K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, D7K enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceProbing the Active Center of Benzaldehyde Lyase with Substitutions and the Pseudosubstrate Analogue Benzoylphosphonic Acid Methyl Ester., Brandt GS, Nemeria N, Chakraborty S, McLeish MJ, Yep A, Kenyon GL, Petsko GA, Jordan F, Ringe D, Biochemistry. 2008 Jun 21;. PMID:18570438
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (3d7k.pdb1.gz) 329 Kb
  • LPC: Ligand-Protein Contacts for 3D7K
  • CSU: Contacts of Structural Units for 3D7K
  • Likely Quarternary Molecular Structure file(s) for 3D7K
  • Structure Factors (694 Kb)
  • Retrieve 3D7K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D7K from S2C, [Save to disk]
  • Re-refined 3d7k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3D7K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d7k] [3d7k_A] [3d7k_B]
  • SWISS-PROT database: [P51853] [Q9F4L3]

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