3D7O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEM, MBN, NO2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • peroxidase activity


    • B
  • peroxidase activity


    • Primary referenceThe nitrite anion binds to human hemoglobin via the uncommon O-nitrito mode., Yi J, Safo MK, Richter-Addo GB, Biochemistry. 2008 Aug 12;47(32):8247-9. Epub 2008 Jul 17. PMID:18630930
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3d7o.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 3D7O
  • CSU: Contacts of Structural Units for 3D7O
  • Likely Quarternary Molecular Structure file(s) for 3D7O
  • Structure Factors (1023 Kb)
  • Retrieve 3D7O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D7O from S2C, [Save to disk]
  • Re-refined 3d7o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3D7O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d7o] [3d7o_A] [3d7o_B]
  • SWISS-PROT database: [P69905] [P68871]
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Belongs to the pore-forming globin (globin) family according to TCDB.

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