3D9D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FAD, GOL, N6C	enzyme
Gene Ontology	Chain Function Process Component C, B, A, D
Primary reference	Crystal Structures of Intermediates in the Nitroalkane Oxidase Reaction (dagger) (double dagger)., Heroux A, Bozinovski DM, Valley MP, Fitzpatrick PF, Orville AM, Biochemistry. 2009 Mar 27. PMID:19265437

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk] Biological Unit Coordinates (3d9d.pdb1.gz) 276 Kb LPC: Ligand-Protein Contacts for 3D9D CSU: Contacts of Structural Units for 3D9D Likely Quarternary Molecular Structure file(s) for 3D9D Structure Factors (1964 Kb) Retrieve 3D9D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D9D from S2C, [Save to disk] Re-refined 3d9d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D9D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d9d] [3d9d_A] [3d9d_B] [3d9d_C] [3d9d_D] SWISS-PROT database: [Q8X1D8]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---