3DBX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NAG, PLM	enzyme
Gene Ontology	Chain Function Process Component B cellular response to iron io...
Primary reference	The crystal structure of avian CD1 reveals a smaller, more primordial antigen-binding pocket compared to mammalian CD1., Zajonc DM, Striegl H, Dascher CC, Wilson IA, Proc Natl Acad Sci U S A. 2008 Nov 18;105(46):17925-30. Epub 2008 Nov 12. PMID:19004781

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk] Biological Unit Coordinates (3dbx.pdb1.gz) 131 Kb LPC: Ligand-Protein Contacts for 3DBX CSU: Contacts of Structural Units for 3DBX Likely Quarternary Molecular Structure file(s) for 3DBX Structure Factors (379 Kb) Retrieve 3DBX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DBX from S2C, [Save to disk] Re-refined 3dbx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DBX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dbx] [3dbx_] [3dbx_A] [3dbx_B] SWISS-PROT database: [P61769] [Q5GL29] Domain found in 3DBX: [IGc1 ] by SMART

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