3DCM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SAM enzyme
note 3DCM is a representative structure
Gene TM
Primary referenceCrystal structure of Thermotoga maritima SPOUT superfamily RNA methyltransferase Tm1570 in complex with S-adenosyl-L-methionine., Kim DJ, Kim HS, Lee SJ, Suh SW, Proteins. 2008 Sep 2;74(1):245-249. PMID:18831037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (3dcm.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 3DCM
  • CSU: Contacts of Structural Units for 3DCM
  • Likely Quarternary Molecular Structure file(s) for 3DCM
  • Structure Factors (305 Kb)
  • Retrieve 3DCM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DCM from S2C, [Save to disk]
  • Re-refined 3dcm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DCM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dcm] [3dcm_X]
  • SWISS-PROT database: [Q9X1Q6]

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