3DJH	Isomerase	date	Jun 23, 2008
title	Macrophage Migration Inhibitory Factor (Mif) At 1.25 A Resol
authors	G.V.Crichlow, E.Lolis
compound		source
Molecule: Macrophage Migration Inhibitory Factor Chain: A, B, C Synonym: Mif, Phenylpyruvate Tautomerase, Glycosylation-Inh Factor, Gif; Ec: 5.3.2.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Mif, Glif, Mmif Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11b
symmetry	Space Group: P 21 21 21	R_factor 0.170 R_Free 0.186
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.232 68.255 86.512 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.25 Å
ligand	GOL, IPA, SO4	enzyme	Isomerase E.C.5.3.2.1 BRENDA
Gene Ontology	Chain Function Process Component A, C, B chemoattractant activity
Primary reference	Structural and Kinetic Analyses of Macrophage Migration Inhibitory Factor Active Site Interactions (dagger) (double dagger)., Crichlow GV, Lubetsky JB, Leng L, Bucala R, Lolis EJ, Biochemistry. 2008 Dec 17. PMID:19090677

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (3djh.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 3DJH CSU: Contacts of Structural Units for 3DJH Likely Quarternary Molecular Structure file(s) for 3DJH Structure Factors (1731 Kb) Retrieve 3DJH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DJH from S2C, [Save to disk] Re-refined 3djh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DJH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3DJH

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DJH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3djh_B] [3djh_C] [3djh_A] [3djh] SWISS-PROT database: [P14174] Domain organization of [MIF_HUMAN] by SWISSPFAM

Other resources with information on 3DJH

Community annotation for 3DJH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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