3DK1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, G05, NA	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Potent HIV-1 protease inhibitors incorporating meso-bicyclic urethanes as P2-ligands: structure-based design, synthesis, biological evaluation and protein-ligand X-ray studies., Ghosh AK, Gemma S, Takayama J, Baldridge A, Leshchenko-Yashchuk S, Miller HB, Wang YF, Kovalevsky AY, Koh Y, Weber IT, Mitsuya H, Org Biomol Chem. 2008 Oct 21;6(20):3703-13. Epub 2008 Aug 11. PMID:18843400

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (3dk1.pdb1.gz) 79 Kb LPC: Ligand-Protein Contacts for 3DK1 CSU: Contacts of Structural Units for 3DK1 Likely Quarternary Molecular Structure file(s) for 3DK1 Structure Factors (764 Kb) Retrieve 3DK1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DK1 from S2C, [Save to disk] Re-refined 3dk1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DK1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dk1] [3dk1_A] [3dk1_B] SWISS-PROT database: [P03367]

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