3DPD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	41A BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Achieving multi-isoform PI3K inhibition in a series of substituted 3,4-dihydro-2H-benzo[1,4]oxazines., Perry B, Alexander R, Bennett G, Buckley G, Ceska T, Crabbe T, Dale V, Gowers L, Horsley H, James L, Jenkins K, Crepy K, Kulisa C, Lightfoot H, Lock C, Mack S, Morgan T, Nicolas AL, Pitt W, Sabin V, Wright S, Bioorg Med Chem Lett. 2008 Aug 15;18(16):4700-4. Epub 2008 Jul 5. PMID:18644721

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk] Biological Unit Coordinates (3dpd.pdb1.gz) 138 Kb LPC: Ligand-Protein Contacts for 3DPD CSU: Contacts of Structural Units for 3DPD Likely Quarternary Molecular Structure file(s) for 3DPD Structure Factors (944 Kb) Retrieve 3DPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DPD from S2C, [Save to disk] Re-refined 3dpd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dpd] [3dpd_A] SWISS-PROT database: [P48736] Domains found in 3DPD: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

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