OCA Atlas for 3DPQ

3DPQ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ALC, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, H, D, G

Primary reference

Allosteric coupling between the lid and interdomain linker in DnaK revealed by inhibitor binding studies., Liebscher M, Roujeinikova A, J Bacteriol. 2009 Mar;191(5):1456-62. Epub 2008 Dec 19. PMID:19103929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (174 Kb) [Save to disk]

Biological Unit Coordinates (3dpq.pdb1.gz) 44 Kb

Biological Unit Coordinates (3dpq.pdb2.gz) 45 Kb

Biological Unit Coordinates (3dpq.pdb3.gz) 44 Kb

Biological Unit Coordinates (3dpq.pdb4.gz) 43 Kb

LPC: Ligand-Protein Contacts for 3DPQ

CSU: Contacts of Structural Units for 3DPQ

Likely Quarternary Molecular Structure file(s) for 3DPQ

Structure Factors (568 Kb)

Retrieve 3DPQ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3DPQ from S2C, [Save to disk]

Re-refined 3dpq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DPQ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dpq] [3dpq_A] [3dpq_B] [3dpq_C] [3dpq_D] [3dpq_E] [3dpq_F] [3dpq_G] [3dpq_H]

SWISS-PROT database: [P0A6Y8] [P37362]

Belongs to the cation channel-forming heat shock protein-70 (hsp70) family

according to TCDB.

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