3DUG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ARG, GOL, KCX, ZN	enzyme
Gene Ontology	Chain Function Process Component G, H, B, C, F, E, D, A
Primary reference	Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes., Xiang DF, Patskovsky Y, Xu C, Meyer AJ, Sauder JM, Burley SK, Almo SC, Raushel FM, Biochemistry. 2009 May 5;48(17):3730-42. PMID:19281183

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (497 Kb) [Save to disk] Biological Unit Coordinates (3dug.pdb1.gz) 488 Kb LPC: Ligand-Protein Contacts for 3DUG CSU: Contacts of Structural Units for 3DUG Likely Quarternary Molecular Structure file(s) for 3DUG Structure Factors (1057 Kb) Retrieve 3DUG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DUG from S2C, [Save to disk] Re-refined 3dug structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DUG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dug] [3dug_A] [3dug_B] [3dug_C] [3dug_D] [3dug_E] [3dug_F] [3dug_G] [3dug_H] SWISS-PROT database:

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