3DVI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural Alterations within Native Amyloidogenic Immunoglobulin Light Chains., Randles EG, Thompson JR, Martin DJ, Ramirez-Alvarado M, J Mol Biol. 2009 May 29;389(1):199-210. Epub 2009 Apr 8. PMID:19361523
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3dvi.pdb1.gz) 87 Kb
  • CSU: Contacts of Structural Units for 3DVI
  • Likely Quarternary Molecular Structure file(s) for 3DVI
  • Structure Factors (249 Kb)
  • Retrieve 3DVI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DVI from S2C, [Save to disk]
  • Re-refined 3dvi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DVI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dvi] [3dvi_A]
  • SWISS-PROT database:
  • Domain found in 3DVI: [IGv ] by SMART

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