OCA Atlas for 3DX7

3DX7

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACT, GOL

enzyme

Gene
Ontology

Chain	Function	Process	Component
B		cellular response to iron io...

Primary reference

Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition., Archbold JK, Macdonald WA, Gras S, Ely LK, Miles JJ, Bell MJ, Brennan RM, Beddoe T, Wilce MC, Clements CS, Purcell AW, McCluskey J, Burrows SR, Rossjohn J, J Exp Med. 2009 Jan 16;206(1):209-19. Epub 2009 Jan 12. PMID:19139173

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]

Biological Unit Coordinates (3dx7.pdb1.gz) 76 Kb

LPC: Ligand-Protein Contacts for 3DX7

CSU: Contacts of Structural Units for 3DX7

Likely Quarternary Molecular Structure file(s) for 3DX7

Structure Factors (866 Kb)

Retrieve 3DX7 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3DX7 from S2C, [Save to disk]

Re-refined 3dx7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DX7 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dx7] [3dx7_A] [3dx7_B] [3dx7_C]

SWISS-PROT database: [P30481] [P61769]

Domain found in 3DX7: [IGc1 ] by SMART

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