3DXN Transferase date Jul 24, 2008
title Crystal Structure Of The Calcium-Dependent Kinase From Toxop Gondii, 541.M00134, Kinase Domain.
authors A.K.Wernimont, J.Lew, I.Kozieradzki, D.Cossar, G.Wasney, Y.H.Lin, A.Hassani, A.Ali, M.Schapira, A.Bochkarev, C.H.Arrowsmith, C.Bou M.Wikstrom, A.M.Edwards, R.Hui, J.D.Artz, M.Amani, Structural Ge Consortium (Sgc)
compound source
Molecule: Calmodulin-Like Domain Protein Kinase Isoform 3
Chain: A
Engineered: Yes
Organism_scientific: Toxoplasma Gondii
Organism_taxid: 5811
Gene: 541.M00134
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15mhl
symmetry Space Group: I 4
R_factor 0.230 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.345 121.345 45.521 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.17 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (3dxn.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 3DXN
  • Likely Quarternary Molecular Structure file(s) for 3DXN
  • Structure Factors (498 Kb)
  • Retrieve 3DXN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DXN from S2C, [Save to disk]
  • Re-refined 3dxn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DXN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DXN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3DXN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dxn] [3dxn_A]
  • SWISS-PROT database: [Q3HNM6]
  • Domain organization of [Q3HNM6_TOXGO] by SWISSPFAM
  • Domain found in 3DXN: [S_TKc ] by SMART
  • Other resources with information on 3DXN
  • Community annotation for 3DXN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science