3DY3		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SLR	enzyme
Gene Ontology	Chain Function Process Component 2, N proteasome core complex, bet... D, R proteasome core complex, alp... F, T M, 1 O, A proteasome core complex, alp... P, B proteasome core complex, alp... Q, C S, E proteasome core complex, alp... U, G proteasome core complex, alp... V, Y, H, K W, I endopeptidase activator acti... proteasome core complex, bet... X, J endopeptidase activator acti... proteasome core complex, bet... Z, L
Primary reference	Structural Analysis of Spiro beta-Lactone Proteasome Inhibitors., Groll M, Balskus EP, Jacobsen EN, J Am Chem Soc. 2008 Oct 17. PMID:18928262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1006 Kb) [Save to disk] Biological Unit Coordinates (3dy3.pdb1.gz) 999 Kb LPC: Ligand-Protein Contacts for 3DY3 CSU: Contacts of Structural Units for 3DY3 Likely Quarternary Molecular Structure file(s) for 3DY3 Structure Factors (6870 Kb) Retrieve 3DY3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DY3 from S2C, [Save to disk] Re-refined 3dy3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DY3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dy3] [3dy3_1] [3dy3_2] [3dy3_A] [3dy3_B] [3dy3_C] [3dy3_D] [3dy3_E] [3dy3_F] [3dy3_G] [3dy3_H] [3dy3_I] [3dy3_J] [3dy3_K] [3dy3_L] [3dy3_M] [3dy3_N] [3dy3_O] [3dy3_P] [3dy3_Q] [3dy3_R] [3dy3_S] [3dy3_T] [3dy3_U] [3dy3_V] [3dy3_W] [3dy3_X] [3dy3_Y] [3dy3_Z] SWISS-PROT database: [P40302] [P23639] [P21242] [P23638] [P32379] [P21243] [P40303] [P23724] [P22141] [P25451] [P30657] [P30656] [P38624] [P25043] Domain found in 3DY3: [Proteasome_A_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---