3E1U	Hydrolase	date	Aug 04, 2008
title	The Crystal Structure Of The Anti-Viral Apobec3g Catalytic D
authors	L.Holden, C.Prochnow, Y.P.Chang, R.Bransteitter, L.Chelico, U.Sen R.C.Stevens, R.F.Goodman, X.S.Chen
compound		source
Molecule: Dna Dc->Du-Editing Enzyme Apobec-3g Chain: A Fragment: Apobec3g Catalytic Domain (Unp Residues 197-380) Synonym: Apobec-Related Cytidine Deaminase, Arcd, Apobec-Re Protein, Arp-9, Cem-15, Cem15; Ec: 3.5.4.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Apobec3g, Mds019 Expression_system: Escherichia Coli Expression_system_strain: Xa-90 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p-1
symmetry	Space Group: C 1 2 1	R_factor 0.251 R_Free 0.267
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.464 57.329 40.578 90.00 96.46 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	ZN	enzyme	Hydrolase E.C.3.5.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications., Holden LG, Prochnow C, Chang YP, Bransteitter R, Chelico L, Sen U, Stevens RC, Goodman MF, Chen XS, Nature. 2008 Nov 6;456(7218):121-4. Epub 2008 Oct 12. PMID:18849968

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (3e1u.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 3E1U CSU: Contacts of Structural Units for 3E1U Likely Quarternary Molecular Structure file(s) for 3E1U Structure Factors (135 Kb) Retrieve 3E1U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3E1U from S2C, [Save to disk] Re-refined 3e1u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3E1U in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3E1U

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3E1U, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3e1u] [3e1u_A] SWISS-PROT database: [Q9HC16] Domain organization of [ABC3G_HUMAN] by SWISSPFAM

Other resources with information on 3E1U

Community annotation for 3E1U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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